BackBrowsing Artículos, Comunicaciones, Libros by Author "Egaña-Aranguren, Mikel"
Now showing items 1-6 of 6
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Automatically exposing OpenLifeData via SADI semantic Web Services
; ; ; ; Egaña Aranguren, Mikel
; ; (Biomed Central, 2014-11-19)
Background: Two distinct trends are emerging with respect to how data is shared, collected, and analyzed within the bioinformatics community. First, Linked Data, exposed as SPARQL endpoints, promises to make data easier ... -
Executing SADI services in Galaxy
Egaña Aranguren, Mikel; Rodríguez González, Alejandro; Wilkinson, Mark D. (Biomed Central, 2014-09-22)
Background: In recent years Galaxy has become a popular workflow management system in bioinformatics, due to its ease of installation, use and extension. The availability of Semantic Web-oriented tools in Galaxy, however, ... -
In-situ migration of hand crafted ontologies to Reason-able Forms
Egaña Aranguren, Mikel; ; ; (Elservier, 2008-02-29)
A methodology for in situ migration of a hand-crafted DAG (Directed Acyclic Graph) to an explicitly described, structurally validated OWL version is presented. The original DAG is a dynamic entity, being updated daily. ... -
Ontology Design Patterns for bio-ontologies: a case study on the Cell Cycle Ontology
Egaña Aranguren, Mikel; ; ; (Springer Nature, 2008-04-29)
Bio-ontologies are key elements of knowledge management in bioinformatics. Rich and rigorous bio-ontologies should represent biological knowledge with high fidelity and robustness. The richness in bio-ontologies is a prior ... -
The Cell Cycle Ontology: An application ontology for the representation and integrated analysis of the cell cycle pro- cess
; Egaña Aranguren, Mikel; ; ; ; ; ; ; (BMC, 2009-05-29)
The Cell Cycle Ontology (CCO) is an application ontology that automatically captures and integrates detailed knowledge on the cell cycle process by combining, interlinking and enriching knowledge from various sources. CCO ... -
Understanding and using the meaning of statements in a bio- ontology: recasting the Gene Ontology in OWL
Egaña Aranguren, Mikel; ; ; ; (Springer Nature, 2007-02-20)
The bio-ontology community falls into two camps: first we have biology domain experts, who actually hold the knowledge we wish to capture in ontologies; second, we have ontology specialists, who hold knowledge about ...