Now showing items 41-60 of 256

    • Thumbnail

      Association of TYR SNP rs1042602 with Melanoma Risk and Prognosis 

      Sevilla Mambrilla, Arrate ORCID; Sánchez Díez, Ana; Cobo, Sofía; Izagirre Arribalzaga, Neskuts ORCID; Martínez Cadenas, Conrado; Martí Laborda, Rosa María; Puértolas, Teresa; de Unamuno, Blanca; Bañuls, José; Izu Belloso, Rosa María; Gardeazabal García, Jesús; Asumendi Mallea, Aintzane ORCID; Boyano López, María Dolores ORCID; Alonso Alegre, Santos ORCID (MDPI, 2022-12-01)
      Cutaneous melanoma is the most aggressive of skin tumors. In order to discover new biomarkers that could help us improve prognostic prediction in melanoma patients, we have searched for germline DNA variants associated ...
    • Thumbnail

      Authoritative subspecies diagnosis tool for European honey bees based on ancestryinformative SNPs 

      Momeni, Jamal; Parejo Feuz, Melanie; Nielsen, Rasmus O.; Langa Arranz, Jorge Eliseo ORCID; Montes Asperilla, Iratxe ORCID; Papoutsis, Laetitia; Farajzadeh, Leila; Bendixen, Christian; Căuia, Eliza; Charrière, Jean-Daniel; Coffey, Mary F.; Costa, Cecilia; Dall’Olio, Raffaele; De la Rúa, Pilar; Drazic, M.Maja; Filipi, Janja; Galea, Thomas; Golubovski, Miroljub; Gregorc, Ales; Grigoryan, Karina; Hatjina, Fani; Ilyasov, Rustem; Ivanova, Evgeniya; Janashia, Irakli; Kandemir, Irfan; Karatasou, Aikaterini; Kekecoglu, Meral; Kezic, Nikola; Sz.Matray, Enikö; Mifsud, David; Moosbeckhofer, Rudolf; Nikolenko, Alexei G.; Papachristoforou, Alexandros; Petrov, Plamen; Pinto, M. Alice; Poskryakov, Aleksandr V.; Sharipov, Aglyam Y.; Siceanu, Adrian; Soysal, M.Ihsan; Uzunov, Aleksandar; Zammit-Mangion, Marion; Vingborg, Rikke; Bouga, Maria; Kryger, Per; Meixner, Marina D.; Estomba Recalde, Miren Andone ORCID (BMC, 2021-02-03)
      Background With numerous endemic subspecies representing four of its five evolutionary lineages, Europe holds a large fraction of Apis mellifera genetic diversity. This diversity and the natural distribution range have ...
    • Thumbnail

      Automatically exposing OpenLifeData via SADI semantic Web Services 

      Rodríguez González, Alejandro; Callahan, Alison; Cruz-Toledo, José; García, Adrián; Egaña Aranguren, Mikel ORCID; Dumontier, Michel; Wilkinson, Mark D. (Biomed Central, 2014-11-19)
      Background: Two distinct trends are emerging with respect to how data is shared, collected, and analyzed within the bioinformatics community. First, Linked Data, exposed as SPARQL endpoints, promises to make data easier ...
    • Thumbnail

      Baseline tissue concentrations of metal in aquatic oligochaetes: field and laboratory approaches. 

      Méndez Fernández, Leire ORCID; Martínez Madrid, Maite ORCID; Pardo, Isabel; Rodríguez Rodríguez, María Pilar (Elsevier, 2017-02-04)
      Metal tissue residue evaluation in benthic macroinvertebrates is an important component of an integrated approach to ecological risk assessment of metals and metalloids in the Nalón River basin (North Spain), where historic ...
    • Thumbnail

      BRAF V600E mutational load as a prognosis biomarker in malignant melanoma 

      Sevilla Mambrilla, Arrate ORCID; Morales González, María Celia; Ezcurra García Unzueta, Pilar Ariadna ORCID; Rasero, Javier; Velasco, Verónica; Cancho Galán, Goikoane; Sánchez Díez, Ana; Mujika, Karmele; Penas Lago, Cristina; Smith Zubiaga, Isabel; Asumendi Mallea, Aintzane ORCID; Cortés Díaz, Jesús María; Boyano López, María Dolores ORCID; Alonso Alegre, Santos ORCID (Public Library Science, 2020-03-13)
      Analyzing the mutational load of driver mutations in melanoma could provide valuable information regarding its progression. We aimed at analyzing the heterogeneity of mutational load of BRAF V600E in biopsies of melanoma ...
    • Thumbnail

      Celiac Diasease-associated lncRNA Named HCG14 Regulates NOD1 Expression in Intestinal Cells 

      Santín Gómez, Izortze; Jauregi Miguel, Amaia; Velayos Gainza, Teresa; Castellanos Rubio, Ainara; García Etxebarria, Koldo; Romero Garmendia, Irati; Fernández Jiménez, Nora ORCID; Irastorza Terradillos, Iñaki Xarles ORCID; Castaño González, Luis Antonio ORCID; Bilbao Catalá, José Ramón ORCID (Wiley, 2018-08-01)
      Objective: The aim of the study is to identify additional celiac disease associated loci in the major histocompatibility complex (MHC) independent from classical HLA risk alleles (HLA-DR3-DQ2) and to characterize their ...
    • Thumbnail

      Celiac disease in the Mediterranean area 

      Tucci, Francesca; Astarita, Luca; Abkari, Abdelhak; Abu-Zekry, Mona; Attard, Thomas; Ben Hariz, Mongi; Bilbao Catalá, José Ramón ORCID; Boudraa, Ghazalia; Boukthir, Samir; Costa, Stefano; Djurisic, Veselinka; Hugot, Jean-Pierre; Irastorza Terradillos, Iñaki Xarles ORCID; Kansu, Aydan; Kolacek, Sanja; Magazzu, Giuseppe; Micetic-Turk, Dusanka; Misak, Zrinjka; Roma, Eleftheria; Rossi, Pasqualino; Terzic, Selma; Velmishi, Virtut; Arcidiaco, Carmela; Auricchio, Renata; Greco, Luigi; (BioMed Central, 2014-02)
      Background: The World Gastroenterology Organization recommends developing national guidelines for the diagnosis of Celiac Disease (CD): hence a profile of the diagnosis of CD in each country is required. We aim to describe ...
    • Thumbnail

      Changing genetic architecture of body mass index from infancy to early adulthood: an individual based pooled analysis of 25 twin cohorts 

      Silventoinen, Karri; Li, Weilong; Jelenkovic Moreno, Aline; Sund, Reijo; Yokoyama, Yoshie; Aaltonen, Sari; Piirtola, Maarit; Sugawara, Masumi; Tanaka, Mami; Matsumoto, Satoko; Baker, Laura A.; Tuvblad, Catherine; Tynelius, Per; Rasmussen, Finn; Craig, Jeffrey M.; Saffery, Richard; Willemsen, Gonneke; Bartels, Meike; Van Beijsterveldt, Catharina E. M.; Martin, Nicholas G.; Medland, Sarah E.; Montgomery, Grant W.; Lichtenstein, Paul; Krueger, Robert F.; McGue, Matt; Pahlen, Shandell; Christensen, Kaare; Skytthe, Axel; Kyvik, Kirsten O.; Saudino, Kimberly J.; Dubois, Lise; Boivin, Michel; Brendgen, Mara; Dionne, Ginette; Vitaro, Frank; Ullemar, Vilhelmina; Almqvist, Catarina; Magnusson, Patrik K. E.; Corley, Robin P.; Huibregtse, Brooke M.; Knafo-Noam, Ariel; Mankuta, David; Abramson, Lior; Haworth, Claire M. A.; Plomin, Robert; Bjerregaard-Andersen, Morten; Beck-Nielsen, Henning; Sodemann, Morten; Duncan, Glen E.; Buchwald, Dedra; Burt, S. Alexandra; Klump, Kelly L.; Llewellyn, Clare H.; Fisher, Abigail; Boomsma, Dorret I.; Sørensen, Thorkild I. A.; Kaprio, Jaakko (Nature, 2022-10)
      Background Body mass index (BMI) shows strong continuity over childhood and adolescence and high childhood BMI is the strongest predictor of adult obesity. Genetic factors strongly contribute to this continuity, but it is ...
    • Thumbnail

      Chromosomes trapped in micronuclei are liable to segregation errors 

      Soto, Mar; García Santisteban, Iraia ORCID; Krenning, Lenno; Medema, René H.; Raaijmakers, Jonne A. (Company Biologist LTD, 2018-07-09)
      DNA in micronuclei is likely to get damaged. When shattered DNA from micronuclei gets reincorporated into the primary nucleus, aberrant rearrangements can take place, a phenomenon referred to as chromothripsis. Here, we ...
    • Thumbnail

      CircRNAome of Childhood Acute Lymphoblastic Leukemia: Deciphering Subtype-Specific Expression Profiles and Involvement in TCF3::PBX1 ALL 

      Gutiérrez Camino, Ángela ORCID; Caron, Maxime; Richer, Chantal; Fuchs, Claire; Illarregi, Unai; Poncelet, Lucas; St-Onge, Pascal; Bataille, Alain R.; Tremblay-Dauphinais, Pascal; López López, Elixabet ORCID; Camos, Mireia; Ramírez Orellana, Manuel; Astigarraga Aguirre, María Iciar; Lécuyer, Éric; Bourque, Guillaume; Martín Guerrero, Idoia; Sinnett, Daniel (MDPI, 2024-01-25)
      Childhood B-cell acute lymphoblastic leukemia (B-ALL) is a heterogeneous disease comprising multiple molecular subgroups with subtype-specific expression profiles. Recently, a new type of ncRNA, termed circular RNA (circRNA), ...
    • Thumbnail

      Circulating MiRNAs As Biomarkers In Diffuse Large B-Cell lymphoma: A Systematic Review 

      López Santillán, María; Larrabeiti Etxebarria, Ane; Arzuaga Mendez, Javier; López López, Elixabet ORCID; García-Orad Carles, África ORCID (2018-04-27)
      ...
    • Thumbnail

      Combined Analysis of Methylation and Gene Expression Profiles in Separate Compartments of Small Bowel Mucosa Identified Celiac Disease Patients' Signatures 

      Cielo, D.; Galatola, M.; Fernández Jiménez, Nora ORCID; De Leo, L.; García Etxebarria, Koldo; Loganes, C.; Tommasini, A.; Not, T.; Auricchio, Renata; Greco, Luigi; Bilbao Catalá, José Ramón ORCID (Nature Publishing Group, 2019-07-10)
      By GWAS studies on celiac disease, gene expression was studied at the level of the whole intestinal mucosa, composed by two different compartments: epithelium and lamina propria. Our aim is to analyse the gene-expression ...
    • Thumbnail

      Combined Fluorescent-Chromogenic In Situ Hybridization for Identification and Laser Microdissection of Interphase Chromosomes 

      Paz Gandiaga, Nerea; Zabala, Amaia; Royo, Félix; García-Orad Carles, África ORCID; Zugaza Gurruchaga, José Luis ORCID; Parada, Luis A. (Public Library of Science, 2013)
      Chromosome territories constitute the most conspicuous feature of nuclear architecture, and they exhibit non-random distribution patterns in the interphase nucleus. We observed that in cell nuclei from humans with Down ...
    • Thumbnail

      Comparison of predicted body fat percentage from anthropometric methods and from impedance in university students 

      Arroyo Izaga, Marta; Rocandio Pablo, Ana María ORCID; Ansotegui Alday, Laura; Herrera, Héctor; Salces Beti, Itziar; Rebato Ochoa, Esther Matilde (Cambridge University Press, 2004-11)
      The objective of the present study was to compare different methods for evaluating body fat percentage (BF%) (anthropometric methods and bioelectrical impedance analysis) in university students. Subjects were 653 healthy ...
    • Thumbnail

      Comparison of the Transcriptional Profiles of Melanocytes from Dark and Light Skinned Individuals under Basal Conditions and Following Ultraviolet-B Irradiation 

      López López, Saioa; Smith Zubiaga, Isabel; García de Galdeano Zaldivar, María Alicia ORCID; Boyano López, María Dolores ORCID; García, Oscar; Gardeazabal García, Jesús; Martinez Cadenas, Conrado; Izagirre Arribalzaga, Neskuts ORCID; De la Rúa Vaca, Concepción ORCID; Alonso Alegre, Santos ORCID (Public Library Science, 2015-08-05)
      We analysed the whole-genome transcriptional profile of 6 cell lines of dark melanocytes (DM) and 6 of light melanocytes (LM) at basal conditions and after ultraviolet-B (UVB) radiation at different time points to investigate ...
    • Thumbnail

      Confirmation of involvement of new variants at CDKN2A/B in pediatric acute lymphoblastic leukemia susceptibility in the Spanish population 

      Gutiérrez Camino, Ángela ORCID; Martín Guerrero, Idoia; García de Andoin Barandiaran, Nagore; Sastre, Ana; Carbone Bañeres, Ana; Astigarraga Aguirre, María Iciar; Navajas Gutiérrez, Aurora; García-Orad Carles, África ORCID (Public Library Science, 2017-05-08)
      The locus CDKN2A/B (9p21.3), which comprises the tumor suppressors genes CDKN2A and CDKN2B and the long noncoding RNA (lncRNA) known as ANRIL (or CDKN2B-AS), was associated with childhood acute lymphoblastic leukemia (ALL) ...
    • Thumbnail

      Connectivity and Population Structure of Albacore Tuna Across Southeast Atlantic and Southwest Indian Oceans Inferred from Multidisciplinary Methodology 

      Nikolic, Natacha; Montes Asperilla, Iratxe ORCID; Lalire, Maxime; Puech, Alexis; Bodin, Nathalie; Arnaud-Haond, Sophie; Kerwath, Sven; Corse, Emmanuel; Gaspar, Philippe; Hollanda, Stephanie; Bourjea, Jerome; West, Wendy; Bonhommeau, Sylvain (Nature, 2020-09-24)
      Albacore tuna (Thunnus alalunga) is an important target of tuna fisheries in the Atlantic and Indian Oceans. The commercial catch of albacore is the highest globally among all temperate tuna species, contributing around ...
    • Thumbnail

      Detailed dissection of UBE3A-mediated DDI1 ubiquitination. 

      Elu Arantzamendi, Nagore ORCID; Osinalde Moraleja, Nerea ORCID; Beaskoetxea Lejarzegi, Javier; Ramírez Sánchez, Juan Manuel ORCID; Lectez, Benoît; Aloria Escolastico, Kerman; Rodríguez Pérez, José Antonio ORCID; Arizmendi Bastarrika, Jesús María ORCID; Mayor Martínez, Ugo ORCID (Frontiers, 2019-05-03)
      The ubiquitin E3 ligase UBE3A has been widely reported to interact with the proteasome, but it is still unclear how this enzyme regulates by ubiquitination the different proteasomal subunits. The proteasome receptor DDI1 ...
    • Thumbnail

      Detection of Atomic Scale Changes in the Free Volume Void Size of Three-Dimensional Colorectal Cancer Cell Culture Using Positron Annihilation Lifetime Spectroscopy 

      Axpe Iza, Eneko; López Euba, Tamara; Castellanos Rubio, Ainara; Mérida Sanz, David; García Martínez, José Angel; Plaza-Izurieta, Leticia; Fernández-Jiménez, Nora; Plazaola Muguruza, Fernando ORCID; Bilbao Catalá, José Ramón ORCID (Public Library of Science, 2014-01-02)
      Positron annihilation lifetime spectroscopy (PALS) provides a direct measurement of the free volume void sizes in polymers and biological systems. This free volume is critical in explaining and understanding physical and ...
    • Thumbnail

      Detection of Phylogenetically Informative Polymorphisms in the Entire Euchromatic Portion of Human Y Chromosome From a Sardinian Sample 

      Francalacci, Paolo; Sanna, Daria; Useli, Antonella; Berutti, Riccardo; Barbato, Mario; Whalen, Michael B.; Angius, Andrea; Sidore, Carlo; Alonso Alegre, Santos ORCID; Tofanelli, Sergio; Cucca, Francesco (Biomed Central, 2015-04-30)
      BACKGROUND: Next-Generation Sequencing methods have led to a great increase in phylogenetically useful markers within the male specific portion of the Y chromosome, but previous studies have limited themselves to the study ...